Alignment represention:
-> The line labled 'iso' is the isostericity base-pair indication. A Star '*' represents the matched location in the seqeunce is a of part a matched isosteric base-pair.A plus symbol '+' represents the matched location is a part of matched non-isosteric base-pair.
-> The line labeled 'edge' is the interacting edges. 'W' is for Watson-Crick, 'H' is for Hoogsteen, and 'S' is for sugar edge.Upper case letters are for 'cis' orientation base-pairs while lower case letters are for 'trans' orientation base-pairs.
-> The line labeled 'struc' represents the base-pair locations. A pair of '(' and ')' represent the base-pair that was identified in the first stage,while '<' and '>' represent the base-pair that was identified in the second stage.
-> A dot in the sequence represents the breakage location of the original sequence due to presentation of multiple strands in the query motif.An '-' symbol represents a gap in the sequence.
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


Alignment Score: 16.200


Aligning:
Query:	1S72_0:2836-2844
Target:	1VX6_A:3697-3705

iso	..*....*.
edge	..S....W.
struc	..(....).

iso	*.*......
edge	s.h......
struc	(.)......

	GUACAAGAC
	*|* | |*|
	GUAGACGAC

struc	(.)......
edge	s.h......
iso	*.*......

struc	..(....).
edge	..S....W.
iso	..*....*.



Alignment Score: 15.200


Aligning:
Query:	1S72_0:2836-2844
Target:	1VW3_A:3135-3143

iso	..*....*.
edge	..S....W.
struc	..(....).

iso	*.*......
edge	s.h......
struc	(.)......

	GUACAAGAC
	*|* |  * 
	UUAUACUAA

struc	(.)......
edge	s.h......
iso	*.*......

struc	..(....).
edge	..S....W.
iso	..*....*.