Alignment represention:
-> The line labled 'iso' is the isostericity base-pair indication. A Star '*' represents the matched location in the seqeunce is a of part a matched isosteric base-pair.A plus symbol '+' represents the matched location is a part of matched non-isosteric base-pair.
-> The line labeled 'edge' is the interacting edges. 'W' is for Watson-Crick, 'H' is for Hoogsteen, and 'S' is for sugar edge.Upper case letters are for 'cis' orientation base-pairs while lower case letters are for 'trans' orientation base-pairs.
-> The line labeled 'struc' represents the base-pair locations. A pair of '(' and ')' represent the base-pair that was identified in the first stage,while '<' and '>' represent the base-pair that was identified in the second stage.
-> A dot in the sequence represents the breakage location of the original sequence due to presentation of multiple strands in the query motif.An '-' symbol represents a gap in the sequence.
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


Alignment Score: 9.400


Aligning:
Query:	4V19_A:796-798_988-990
Target:	2QBG_B:1663-1665_1995-1997

iso	.*...*.
edge	.w...w.
struc	.(...).

	AAA.UCU
	 *|.|* 
	GAA.UCC

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 8.200


Aligning:
Query:	4V19_A:796-798_988-990
Target:	2QBG_B:1433-1435_1557-1560

iso	.*...*..
edge	.w...w..
struc	.(...)..

	AAA.UCU-
	|* . *| 
	AAG.CCUG

struc	.(...)..
edge	.w...w..
iso	.*...*..



Alignment Score: 9.400


Aligning:
Query:	4V19_A:796-798_988-990
Target:	1VW3_A:1615-1617_1895-1897

iso	.*...*.
edge	.w...w.
struc	.(...).

	AAA.UCU
	 *|.|* 
	GAA.UCC

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 9.400


Aligning:
Query:	4V19_A:796-798_988-990
Target:	4QCN_A:1710-1712_2017-2019

iso	.*...*.
edge	.w...w.
struc	.(...).

	AAA.UCU
	 *|.|* 
	CAA.UCG

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 8.200


Aligning:
Query:	4V19_A:796-798_988-990
Target:	1S72_0:1741-1743_2036-2038

iso	.*...*.
edge	.w...w.
struc	.(...).

	AAA.UCU
	 * . * 
	UAG.CCA

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 9.400


Aligning:
Query:	4V19_A:796-798_988-990
Target:	4IOA_X:1680-1682_1978-1980

iso	.*...*.
edge	.w...w.
struc	.(...).

	AAA.UCU
	 *|.|* 
	UAA.UCA

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 9.400


Aligning:
Query:	4V19_A:988-990_796-798
Target:	3U5H_5:2338-2340_1895-1897

iso	.*...*.
edge	.w...w.
struc	.(...).

	UCU.AAA
	 *|.|* 
	CCU.AAG

struc	.(...).
edge	.w...w.
iso	.*...*.



Alignment Score: 9.400


Aligning:
Query:	4V19_A:988-990_796-798
Target:	1VX6_A:2631-2633_2163-2165

iso	.*...*.
edge	.w...w.
struc	.(...).

	UCU.AAA
	 *|.|* 
	CCU.AAG

struc	.(...).
edge	.w...w.
iso	.*...*.