Alignment represention:
-> The line labled 'iso' is the isostericity base-pair indication. A Star '*' represents the matched location in the seqeunce is a of part a matched isosteric base-pair.A plus symbol '+' represents the matched location is a part of matched non-isosteric base-pair.
-> The line labeled 'edge' is the interacting edges. 'W' is for Watson-Crick, 'H' is for Hoogsteen, and 'S' is for sugar edge.Upper case letters are for 'cis' orientation base-pairs while lower case letters are for 'trans' orientation base-pairs.
-> The line labeled 'struc' represents the base-pair locations. A pair of '(' and ')' represent the base-pair that was identified in the first stage,while '<' and '>' represent the base-pair that was identified in the second stage.
-> A dot in the sequence represents the breakage location of the original sequence due to presentation of multiple strands in the query motif.An '-' symbol represents a gap in the sequence.
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Alignment Score: 18.800


Aligning:
Query:	2QBG_B:606-610_618-622
Target:	1S72_0:663-667_679-683

iso	.*.*...*.*.
edge	.w.h...s.h.
struc	.(.(...).).

	UUAAC.GGGAG
	 *|*|.|*|*|
	CUAAC.GGGAG

struc	.(.(...).).
edge	.w.h...s.h.
iso	.*.*...*.*.



Alignment Score: 18.200


Aligning:
Query:	2QBG_B:618-622_606-610
Target:	4QCN_A:643-647_629-633

iso	.*.*...*.*.
edge	.s.h...w.h.
struc	.(.(...).).

	GGGAG.UUAAC
	 *|*|.|*|* 
	CGGAG.UUAAG

struc	.(.(...).).
edge	.s.h...w.h.
iso	.*.*...*.*.